Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 AP001094.4-201ENST00000579008 2176 ntBASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 AC010240.3-201ENST00000607688 395 ntBASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 AC116562.4-202ENST00000641738 218 ntBASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 AC133963.1-201ENST00000504166 1679 ntBASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LCN1P1Q5VSP4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 UNC93B2-201ENST00000285383 730 ntBASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 TSPY20P-201ENST00000450910 630 ntBASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 AL355312.1-201ENST00000407115 2176 ntBASIC16.09■□□□□ 0.17
LCN1P1Q5VSP4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LCN1P1Q5VSP4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 AC116407.2-201ENST00000613639 860 ntBASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 AC092338.2-201ENST00000568827 1415 ntBASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LCN1P1Q5VSP4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms