Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-4Q5R1I0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Gm2810-201ENSMUST00000118681 990 ntBASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Gm27920-201ENSMUST00000183953 96 ntBASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-4Q5R1I0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms