Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Gm6973-201ENSMUST00000117080 721 ntBASIC14.57□□□□□ -0.08
Sox4Q06831 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.57□□□□□ -0.08
Sox4Q06831 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox4Q06831 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sox4Q06831 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox4Q06831 Rprl2-201ENSMUST00000157150 290 ntBASIC14.56□□□□□ -0.08
Sox4Q06831 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sox4Q06831 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.56□□□□□ -0.08
Sox4Q06831 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.56□□□□□ -0.08
Sox4Q06831 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox4Q06831 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox4Q06831 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox4Q06831 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Sox4Q06831 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Sox4Q06831 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Sox4Q06831 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox4Q06831 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox4Q06831 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox4Q06831 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox4Q06831 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.55□□□□□ -0.08
Sox4Q06831 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox4Q06831 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.54□□□□□ -0.08
Sox4Q06831 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.54□□□□□ -0.08
Sox4Q06831 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Gm26308-201ENSMUST00000157768 69 ntBASIC14.54□□□□□ -0.08
Sox4Q06831 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms