Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Uba52P62984 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Uba52P62984 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Uba52P62984 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Uba52P62984 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.9□□□□□ -0.34
Uba52P62984 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Uba52P62984 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Uba52P62984 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.9□□□□□ -0.34
Uba52P62984 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Uba52P62984 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Uba52P62984 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Uba52P62984 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Uba52P62984 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Uba52P62984 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Uba52P62984 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Uba52P62984 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.89□□□□□ -0.35
Uba52P62984 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.89□□□□□ -0.35
Uba52P62984 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Gm25745-201ENSMUST00000174945 133 ntBASIC12.89□□□□□ -0.35
Uba52P62984 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.89□□□□□ -0.35
Uba52P62984 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Uba52P62984 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Uba52P62984 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Uba52P62984 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Uba52P62984 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Uba52P62984 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.88□□□□□ -0.35
Uba52P62984 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.88□□□□□ -0.35
Uba52P62984 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.88□□□□□ -0.35
Uba52P62984 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.88□□□□□ -0.35
Uba52P62984 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.88□□□□□ -0.35
Uba52P62984 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Uba52P62984 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.88□□□□□ -0.35
Uba52P62984 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.88□□□□□ -0.35
Uba52P62984 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Uba52P62984 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Uba52P62984 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Uba52P62984 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Uba52P62984 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.87□□□□□ -0.35
Uba52P62984 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.87□□□□□ -0.35
Uba52P62984 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.87□□□□□ -0.35
Uba52P62984 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Uba52P62984 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms