Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm5364-201ENSMUST00000216789 889 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cdh11P55288 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh11P55288 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh11P55288 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Cdh11P55288 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh11P55288 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.52□□□□□ -0.25
Cdh11P55288 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh11P55288 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.52□□□□□ -0.25
Cdh11P55288 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh11P55288 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Gm18622-201ENSMUST00000219361 595 ntBASIC13.52□□□□□ -0.25
Cdh11P55288 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.52□□□□□ -0.25
Cdh11P55288 Gm15590-201ENSMUST00000078419 552 ntBASIC13.52□□□□□ -0.25
Cdh11P55288 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.52□□□□□ -0.25
Cdh11P55288 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh11P55288 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh11P55288 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Cdh11P55288 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh11P55288 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdh11P55288 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.51□□□□□ -0.25
Cdh11P55288 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Cdh11P55288 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.51□□□□□ -0.25
Cdh11P55288 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdh11P55288 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh11P55288 Gm8000-201ENSMUST00000188378 592 ntBASIC13.51□□□□□ -0.25
Cdh11P55288 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdh11P55288 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cdh11P55288 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh11P55288 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh11P55288 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdh11P55288 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms