Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.22□□□□□ -0.13
Cntn1P12960 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.22□□□□□ -0.13
Cntn1P12960 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cntn1P12960 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.22□□□□□ -0.13
Cntn1P12960 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Cntn1P12960 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.21□□□□□ -0.13
Cntn1P12960 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.21□□□□□ -0.13
Cntn1P12960 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.21□□□□□ -0.13
Cntn1P12960 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.21□□□□□ -0.13
Cntn1P12960 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cntn1P12960 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cntn1P12960 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cntn1P12960 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cntn1P12960 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cntn1P12960 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.21□□□□□ -0.14
Cntn1P12960 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cntn1P12960 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.2□□□□□ -0.14
Cntn1P12960 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cntn1P12960 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.2□□□□□ -0.14
Cntn1P12960 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cntn1P12960 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cntn1P12960 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cntn1P12960 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cntn1P12960 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.19□□□□□ -0.14
Cntn1P12960 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.19□□□□□ -0.14
Cntn1P12960 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.19□□□□□ -0.14
Cntn1P12960 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.19□□□□□ -0.14
Cntn1P12960 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms