Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.91□□□□□ -0.34
UbbP0CG49 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
UbbP0CG49 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.91□□□□□ -0.34
UbbP0CG49 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
UbbP0CG49 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UbbP0CG49 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.9□□□□□ -0.34
UbbP0CG49 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.9□□□□□ -0.34
UbbP0CG49 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UbbP0CG49 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UbbP0CG49 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.9□□□□□ -0.34
UbbP0CG49 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UbbP0CG49 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.9□□□□□ -0.34
UbbP0CG49 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UbbP0CG49 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
UbbP0CG49 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.89□□□□□ -0.35
UbbP0CG49 Gm12008-201ENSMUST00000117791 755 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Gm8097-201ENSMUST00000117903 829 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UbbP0CG49 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Gm43767-201ENSMUST00000198933 381 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UbbP0CG49 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UbbP0CG49 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.89□□□□□ -0.35
UbbP0CG49 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UbbP0CG49 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UbbP0CG49 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UbbP0CG49 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UbbP0CG49 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
UbbP0CG49 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms