Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.51□□□□□ -0.57
P04944 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.51□□□□□ -0.57
P04944 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P04944 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
P04944 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04944 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.5□□□□□ -0.57
P04944 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
P04944 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.5□□□□□ -0.57
P04944 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
P04944 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.5□□□□□ -0.57
P04944 Gm27300-201ENSMUST00000184085 97 ntBASIC11.5□□□□□ -0.57
P04944 Gm27335-201ENSMUST00000184758 97 ntBASIC11.5□□□□□ -0.57
P04944 Gm28659-201ENSMUST00000188013 759 ntBASIC11.5□□□□□ -0.57
P04944 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Gm5864-201ENSMUST00000202263 970 ntBASIC11.5□□□□□ -0.57
P04944 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.5□□□□□ -0.57
P04944 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.5□□□□□ -0.57
P04944 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.5□□□□□ -0.57
P04944 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04944 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.49□□□□□ -0.57
P04944 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P04944 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P04944 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.49□□□□□ -0.57
P04944 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.49□□□□□ -0.57
P04944 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.49□□□□□ -0.57
P04944 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Mir5126-201ENSMUST00000175513 77 ntBASIC11.49□□□□□ -0.57
P04944 Gm9726-201ENSMUST00000180321 678 ntBASIC11.49□□□□□ -0.57
P04944 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.49□□□□□ -0.57
P04944 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.49□□□□□ -0.57
P04944 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04944 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
P04944 Gm10819-201ENSMUST00000099988 561 ntBASIC11.49□□□□□ -0.57
P04944 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04944 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
P04944 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04944 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.49□□□□□ -0.57
P04944 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04944 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms