Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P04224 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
P04224 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.03□□□□□ -0.32
P04224 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04224 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.03□□□□□ -0.32
P04224 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04224 Mir6982-201ENSMUST00000184354 68 ntBASIC13.03□□□□□ -0.32
P04224 Gm18032-201ENSMUST00000222541 538 ntBASIC13.03□□□□□ -0.32
P04224 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.03□□□□□ -0.32
P04224 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
P04224 Gm7367-201ENSMUST00000057611 492 ntBASIC13.03□□□□□ -0.32
P04224 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04224 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
P04224 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
P04224 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04224 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
P04224 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
P04224 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
P04224 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04224 Gm10013-201ENSMUST00000106074 672 ntBASIC13.02□□□□□ -0.33
P04224 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.02□□□□□ -0.33
P04224 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.02□□□□□ -0.33
P04224 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
P04224 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.02□□□□□ -0.33
P04224 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.02□□□□□ -0.33
P04224 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
P04224 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
P04224 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04224 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.02□□□□□ -0.33
P04224 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
P04224 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P04224 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P04224 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04224 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Gm9013-201ENSMUST00000132939 882 ntBASIC13.01□□□□□ -0.33
P04224 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P04224 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
P04224 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.01□□□□□ -0.33
P04224 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms