Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.74■□□□□ 0.43
PDGFBP01127 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PDGFBP01127 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 KLF2P3-201ENST00000451977 1087 ntBASIC17.74■□□□□ 0.43
PDGFBP01127 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.74■□□□□ 0.43
PDGFBP01127 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.74■□□□□ 0.43
PDGFBP01127 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 AL353135.1-201ENST00000606729 504 ntBASIC17.74■□□□□ 0.43
PDGFBP01127 AL390754.1-201ENST00000619088 582 ntBASIC17.74■□□□□ 0.43
PDGFBP01127 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.74■□□□□ 0.43
PDGFBP01127 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDGFBP01127 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDGFBP01127 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.74■□□□□ 0.43
PDGFBP01127 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 PI4KAP1-204ENST00000612579 1703 ntBASIC17.73■□□□□ 0.43
PDGFBP01127 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PDGFBP01127 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.73■□□□□ 0.43
PDGFBP01127 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PDGFBP01127 TREML5P-201ENST00000421694 576 ntBASIC17.73■□□□□ 0.43
PDGFBP01127 DDX43P3-201ENST00000441064 443 ntBASIC17.73■□□□□ 0.43
PDGFBP01127 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 FAM207CP-201ENST00000443486 507 ntBASIC17.73■□□□□ 0.43
PDGFBP01127 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.73■□□□□ 0.43
PDGFBP01127 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.73■□□□□ 0.43
PDGFBP01127 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFBP01127 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFBP01127 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFBP01127 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.72■□□□□ 0.43
PDGFBP01127 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 AL355306.1-201ENST00000415580 579 ntBASIC17.72■□□□□ 0.43
PDGFBP01127 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 AC069335.1-201ENST00000489972 472 ntBASIC17.72■□□□□ 0.43
PDGFBP01127 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.72■□□□□ 0.43
PDGFBP01127 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFBP01127 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.72■□□□□ 0.43
PDGFBP01127 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFBP01127 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFBP01127 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PDGFBP01127 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFBP01127 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PDGFBP01127 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFBP01127 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms