Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccr6O54689 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccr6O54689 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ccr6O54689 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Mir770-201ENSMUST00000103252 94 ntBASIC12.43□□□□□ -0.42
Ccr6O54689 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccr6O54689 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.43□□□□□ -0.42
Ccr6O54689 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccr6O54689 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccr6O54689 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccr6O54689 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccr6O54689 Gm13312-201ENSMUST00000119631 718 ntBASIC12.42□□□□□ -0.42
Ccr6O54689 Gm13559-201ENSMUST00000120476 863 ntBASIC12.42□□□□□ -0.42
Ccr6O54689 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.42□□□□□ -0.42
Ccr6O54689 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.42□□□□□ -0.42
Ccr6O54689 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccr6O54689 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccr6O54689 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccr6O54689 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccr6O54689 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccr6O54689 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Gm10653-202ENSMUST00000139570 835 ntBASIC12.41□□□□□ -0.42
Ccr6O54689 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccr6O54689 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccr6O54689 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.41□□□□□ -0.42
Ccr6O54689 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccr6O54689 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccr6O54689 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccr6O54689 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.41□□□□□ -0.42
Ccr6O54689 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccr6O54689 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccr6O54689 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms