Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cystm1Q8K353 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gm7153-201ENSMUST00000117092 455 ntBASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gm11336-201ENSMUST00000118168 334 ntBASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Gm17971-201ENSMUST00000190239 806 ntBASIC9.36□□□□□ -0.91
Cystm1Q8K353 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC9.36□□□□□ -0.91
Cystm1Q8K353 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cystm1Q8K353 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.35□□□□□ -0.91
Cystm1Q8K353 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC9.35□□□□□ -0.91
Cystm1Q8K353 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gm28033-201ENSMUST00000184224 96 ntBASIC9.35□□□□□ -0.91
Cystm1Q8K353 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gm29707-201ENSMUST00000196325 491 ntBASIC9.35□□□□□ -0.91
Cystm1Q8K353 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms