Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin9Q8C735 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lin9Q8C735 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin9Q8C735 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lin9Q8C735 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.24■□□□□ 0.19
Lin9Q8C735 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin9Q8C735 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lin9Q8C735 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lin9Q8C735 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.23■□□□□ 0.19
Lin9Q8C735 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.22■□□□□ 0.19
Lin9Q8C735 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.22■□□□□ 0.19
Lin9Q8C735 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.22■□□□□ 0.19
Lin9Q8C735 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.22■□□□□ 0.19
Lin9Q8C735 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.22■□□□□ 0.19
Lin9Q8C735 Gm44492-201ENSMUST00000197012 141 ntBASIC16.22■□□□□ 0.19
Lin9Q8C735 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.22■□□□□ 0.19
Lin9Q8C735 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Lin9Q8C735 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lin9Q8C735 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lin9Q8C735 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.21■□□□□ 0.19
Lin9Q8C735 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Lin9Q8C735 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.21■□□□□ 0.19
Lin9Q8C735 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lin9Q8C735 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.21■□□□□ 0.19
Lin9Q8C735 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.21■□□□□ 0.19
Lin9Q8C735 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lin9Q8C735 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lin9Q8C735 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lin9Q8C735 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lin9Q8C735 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lin9Q8C735 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.21■□□□□ 0.18
Lin9Q8C735 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lin9Q8C735 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms