Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Pcdh20Q8BIZ0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh20Q8BIZ0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdh20Q8BIZ0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh20Q8BIZ0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms