Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.66■□□□□ 0.42
Col11a2Q64739 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.66■□□□□ 0.42
Col11a2Q64739 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.66■□□□□ 0.42
Col11a2Q64739 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.66■□□□□ 0.42
Col11a2Q64739 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col11a2Q64739 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col11a2Q64739 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col11a2Q64739 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col11a2Q64739 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.65■□□□□ 0.42
Col11a2Q64739 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Col11a2Q64739 Gm29127-201ENSMUST00000188304 517 ntBASIC17.65■□□□□ 0.42
Col11a2Q64739 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.65■□□□□ 0.42
Col11a2Q64739 Gm7287-201ENSMUST00000205267 602 ntBASIC17.65■□□□□ 0.42
Col11a2Q64739 Gm18054-201ENSMUST00000207539 555 ntBASIC17.65■□□□□ 0.42
Col11a2Q64739 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col11a2Q64739 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col11a2Q64739 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col11a2Q64739 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Col11a2Q64739 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col11a2Q64739 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm27514-201ENSMUST00000183692 110 ntBASIC17.64■□□□□ 0.41
Col11a2Q64739 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col11a2Q64739 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.64■□□□□ 0.41
Col11a2Q64739 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm11814-201ENSMUST00000119515 929 ntBASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm24644-201ENSMUST00000157114 139 ntBASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.64■□□□□ 0.41
Col11a2Q64739 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Col11a2Q64739 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col11a2Q64739 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.63■□□□□ 0.41
Col11a2Q64739 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Gm14723-201ENSMUST00000118686 215 ntBASIC17.63■□□□□ 0.41
Col11a2Q64739 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.63■□□□□ 0.41
Col11a2Q64739 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Gm7561-201ENSMUST00000211203 886 ntBASIC17.63■□□□□ 0.41
Col11a2Q64739 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col11a2Q64739 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col11a2Q64739 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.62■□□□□ 0.41
Col11a2Q64739 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.62■□□□□ 0.41
Col11a2Q64739 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Col11a2Q64739 Mir8109-201ENSMUST00000184375 117 ntBASIC17.62■□□□□ 0.41
Col11a2Q64739 Gm6983-201ENSMUST00000214912 628 ntBASIC17.62■□□□□ 0.41
Col11a2Q64739 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.62■□□□□ 0.41
Col11a2Q64739 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.62■□□□□ 0.41
Col11a2Q64739 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.62■□□□□ 0.41
Col11a2Q64739 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a2Q64739 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.62■□□□□ 0.41
Col11a2Q64739 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms