Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.71□□□□□ -0.22
Col10a1Q05306 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col10a1Q05306 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col10a1Q05306 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col10a1Q05306 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col10a1Q05306 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Gm11594-201ENSMUST00000122313 162 ntBASIC13.7□□□□□ -0.22
Col10a1Q05306 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.7□□□□□ -0.22
Col10a1Q05306 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col10a1Q05306 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col10a1Q05306 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.69□□□□□ -0.22
Col10a1Q05306 Gm17271-201ENSMUST00000165535 355 ntBASIC13.69□□□□□ -0.22
Col10a1Q05306 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.69□□□□□ -0.22
Col10a1Q05306 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col10a1Q05306 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col10a1Q05306 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col10a1Q05306 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col10a1Q05306 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.68□□□□□ -0.22
Col10a1Q05306 Gm9385-201ENSMUST00000117563 472 ntBASIC13.68□□□□□ -0.22
Col10a1Q05306 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
Col10a1Q05306 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col10a1Q05306 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.68□□□□□ -0.22
Col10a1Q05306 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Gm10175-201ENSMUST00000086013 645 ntBASIC13.68□□□□□ -0.22
Col10a1Q05306 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col10a1Q05306 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms