Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.59■□□□□ 0.25
Tpm1P58771 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.59■□□□□ 0.25
Tpm1P58771 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.59■□□□□ 0.25
Tpm1P58771 Gm18622-201ENSMUST00000219361 595 ntBASIC16.59■□□□□ 0.25
Tpm1P58771 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.59■□□□□ 0.25
Tpm1P58771 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Tpm1P58771 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.59■□□□□ 0.25
Tpm1P58771 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tpm1P58771 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tpm1P58771 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tpm1P58771 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.58■□□□□ 0.25
Tpm1P58771 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tpm1P58771 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tpm1P58771 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tpm1P58771 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.58■□□□□ 0.25
Tpm1P58771 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.58■□□□□ 0.24
Tpm1P58771 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.58■□□□□ 0.24
Tpm1P58771 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.58■□□□□ 0.24
Tpm1P58771 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Tpm1P58771 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tpm1P58771 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tpm1P58771 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.57■□□□□ 0.24
Tpm1P58771 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tpm1P58771 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
Tpm1P58771 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tpm1P58771 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Gm12497-201ENSMUST00000138778 237 ntBASIC16.57■□□□□ 0.24
Tpm1P58771 Gm25745-201ENSMUST00000174945 133 ntBASIC16.57■□□□□ 0.24
Tpm1P58771 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.57■□□□□ 0.24
Tpm1P58771 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.57■□□□□ 0.24
Tpm1P58771 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tpm1P58771 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Grk6-207ENSMUST00000225925 2769 ntBASIC16.56■□□□□ 0.24
Tpm1P58771 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tpm1P58771 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.56■□□□□ 0.24
Tpm1P58771 Gm23547-201ENSMUST00000158210 271 ntBASIC16.56■□□□□ 0.24
Tpm1P58771 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Tpm1P58771 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Tpm1P58771 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tpm1P58771 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tpm1P58771 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tpm1P58771 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.56■□□□□ 0.24
Tpm1P58771 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.56■□□□□ 0.24
Tpm1P58771 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tpm1P58771 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Tpm1P58771 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.55■□□□□ 0.24
Tpm1P58771 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms