Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.4□□□□□ -0.42
Col8a2P25318 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Rprl2-201ENSMUST00000157150 290 ntBASIC12.4□□□□□ -0.42
Col8a2P25318 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.4□□□□□ -0.42
Col8a2P25318 Gm38294-201ENSMUST00000192831 381 ntBASIC12.4□□□□□ -0.42
Col8a2P25318 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.4□□□□□ -0.42
Col8a2P25318 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Gm8396-201ENSMUST00000057361 823 ntBASIC12.4□□□□□ -0.42
Col8a2P25318 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.4□□□□□ -0.42
Col8a2P25318 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col8a2P25318 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col8a2P25318 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Col8a2P25318 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col8a2P25318 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.39□□□□□ -0.43
Col8a2P25318 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Gm25948-201ENSMUST00000175334 112 ntBASIC12.39□□□□□ -0.43
Col8a2P25318 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.39□□□□□ -0.43
Col8a2P25318 Gm18057-201ENSMUST00000208220 503 ntBASIC12.39□□□□□ -0.43
Col8a2P25318 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a2P25318 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.39□□□□□ -0.43
Col8a2P25318 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col8a2P25318 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.38□□□□□ -0.43
Col8a2P25318 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.38□□□□□ -0.43
Col8a2P25318 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Col8a2P25318 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a2P25318 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a2P25318 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.38□□□□□ -0.43
Col8a2P25318 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a2P25318 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Col8a2P25318 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col8a2P25318 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms