Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KRT18P32-201ENST00000424695 1287 ntBASIC21.56■■□□□ 1.04
COL11A2P13942 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.56■■□□□ 1.04
COL11A2P13942 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL11A2P13942 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.56■■□□□ 1.04
COL11A2P13942 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A2P13942 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 TIMM8BP1-201ENST00000452384 211 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 KRT8P48-201ENST00000515599 1220 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 AC069262.1-201ENST00000539058 672 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A2P13942 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A2P13942 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A2P13942 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 PMS2P4-201ENST00000412466 1052 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.55■■□□□ 1.04
COL11A2P13942 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 AL513480.1-201ENST00000451731 511 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A2P13942 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.55■■□□□ 1.04
COL11A2P13942 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.55■■□□□ 1.04
COL11A2P13942 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.55■■□□□ 1.04
COL11A2P13942 AC015911.4-201ENST00000588022 1070 ntBASIC21.55■■□□□ 1.04
COL11A2P13942 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A2P13942 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COL11A2P13942 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL11A2P13942 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A2P13942 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A2P13942 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A2P13942 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A2P13942 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A2P13942 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A2P13942 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A2P13942 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL11A2P13942 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.53■■□□□ 1.04
COL11A2P13942 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A2P13942 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
COL11A2P13942 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A2P13942 HLA-J-202ENST00000469281 1241 ntBASIC21.53■■□□□ 1.04
COL11A2P13942 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL11A2P13942 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.53■■□□□ 1.04
COL11A2P13942 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A2P13942 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 AC073130.3-201ENST00000624389 2278 ntBASIC21.53■■□□□ 1.04
COL11A2P13942 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A2P13942 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A2P13942 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A2P13942 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A2P13942 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms