Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smim1P0C8K7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.23□□□□□ -0.77
Smim1P0C8K7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smim1P0C8K7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smim1P0C8K7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms