Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.88□□□□□ -0.67
TcraP01849 Gm22697-201ENSMUST00000175194 63 ntBASIC10.88□□□□□ -0.67
TcraP01849 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.88□□□□□ -0.67
TcraP01849 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
TcraP01849 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Gm7367-201ENSMUST00000057611 492 ntBASIC10.88□□□□□ -0.67
TcraP01849 Gm10566-201ENSMUST00000086739 996 ntBASIC10.88□□□□□ -0.67
TcraP01849 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TcraP01849 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.87□□□□□ -0.67
TcraP01849 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.87□□□□□ -0.67
TcraP01849 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.87□□□□□ -0.67
TcraP01849 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
TcraP01849 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TcraP01849 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.86□□□□□ -0.67
TcraP01849 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
TcraP01849 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.86□□□□□ -0.67
TcraP01849 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
TcraP01849 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
TcraP01849 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.86□□□□□ -0.67
TcraP01849 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
TcraP01849 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TcraP01849 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TcraP01849 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.85□□□□□ -0.67
TcraP01849 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms