Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.82■□□□□ 0.12
Kcnu1O54982 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Kcnu1O54982 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Kcnu1O54982 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.81■□□□□ 0.12
Kcnu1O54982 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.81■□□□□ 0.12
Kcnu1O54982 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.81■□□□□ 0.12
Kcnu1O54982 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Kcnu1O54982 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Kcnu1O54982 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.8■□□□□ 0.12
Kcnu1O54982 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.8■□□□□ 0.12
Kcnu1O54982 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.8■□□□□ 0.12
Kcnu1O54982 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.8■□□□□ 0.12
Kcnu1O54982 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.8■□□□□ 0.12
Kcnu1O54982 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.8■□□□□ 0.12
Kcnu1O54982 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.8■□□□□ 0.12
Kcnu1O54982 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcnu1O54982 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.79■□□□□ 0.12
Kcnu1O54982 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.79■□□□□ 0.12
Kcnu1O54982 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcnu1O54982 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcnu1O54982 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.78■□□□□ 0.12
Kcnu1O54982 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms