Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Capn6O35646 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Capn6O35646 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.15■□□□□ 0.02
Capn6O35646 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.15■□□□□ 0.02
Capn6O35646 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.15■□□□□ 0.02
Capn6O35646 Gm28033-201ENSMUST00000184224 96 ntBASIC15.15■□□□□ 0.02
Capn6O35646 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.15■□□□□ 0.02
Capn6O35646 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Capn6O35646 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Capn6O35646 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Capn6O35646 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Capn6O35646 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Capn6O35646 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Capn6O35646 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Capn6O35646 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Capn6O35646 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Capn6O35646 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Capn6O35646 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.14■□□□□ 0.01
Capn6O35646 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.14■□□□□ 0.01
Capn6O35646 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Capn6O35646 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Capn6O35646 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.14■□□□□ 0.01
Capn6O35646 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.14■□□□□ 0.01
Capn6O35646 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capn6O35646 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Capn6O35646 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.13■□□□□ 0.01
Capn6O35646 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Capn6O35646 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Capn6O35646 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.13■□□□□ 0.01
Capn6O35646 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn6O35646 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Capn6O35646 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn6O35646 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms