Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.8□□□□□ -0.04
Gm3139J3QK78 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3139J3QK78 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Gm25287-201ENSMUST00000103846 110 ntBASIC14.79□□□□□ -0.04
Gm3139J3QK78 Gm22918-201ENSMUST00000103855 110 ntBASIC14.79□□□□□ -0.04
Gm3139J3QK78 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Gm13464-201ENSMUST00000119418 935 ntBASIC14.79□□□□□ -0.04
Gm3139J3QK78 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.79□□□□□ -0.04
Gm3139J3QK78 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3139J3QK78 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3139J3QK78 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Gm3139J3QK78 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3139J3QK78 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.77□□□□□ -0.05
Gm3139J3QK78 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.77□□□□□ -0.05
Gm3139J3QK78 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Gm3139J3QK78 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm3139J3QK78 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms