Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm37153-201ENSMUST00000193637 231 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm9682-201ENSMUST00000197505 556 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-1A0N8R1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12-1A0N8R1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12-1A0N8R1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12-1A0N8R1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12-1A0N8R1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav12-1A0N8R1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Gm18669-201ENSMUST00000216049 778 ntBASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-1A0N8R1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms