Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm11543-201ENSMUST00000120758 370 ntBASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm18737-201ENSMUST00000173594 937 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm44335-201ENSMUST00000196879 141 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm44297-201ENSMUST00000198304 141 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Gm44346-201ENSMUST00000198851 141 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mindy4b-psA0A1W2P7H6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms