Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 BC037039-201ENSMUST00000192003 2205 ntBASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm4995-201ENSMUST00000117247 432 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm43575-201ENSMUST00000196420 516 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm10175-201ENSMUST00000086013 645 ntBASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm8318-201ENSMUST00000182954 872 ntBASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm18246-201ENSMUST00000221023 728 ntBASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms