Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Celf4-206ENSMUST00000224553 1729 ntBASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.3□□□□□ -0.76
Trav4n-4A0A075B615 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Gm44430-201ENSMUST00000203376 995 ntBASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Trav4n-4A0A075B615 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Gm10052-201ENSMUST00000168019 960 ntBASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Gm7729-201ENSMUST00000050143 801 ntBASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav4n-4A0A075B615 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav4n-4A0A075B615 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms