Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm6659-201ENSMUST00000174752 547 ntBASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-1A0A075B5Z8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm6296-201ENSMUST00000222599 943 ntBASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-1A0A075B5Z8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm18489-201ENSMUST00000172565 551 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms