Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.75■■□□□ 1.07
Atp6v1c1Q9Z1G3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atp6v1c1Q9Z1G3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atp6v1c1Q9Z1G3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Atp6v1c1Q9Z1G3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp6v1c1Q9Z1G3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp6v1c1Q9Z1G3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp6v1c1Q9Z1G3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.71■■□□□ 1.07
Atp6v1c1Q9Z1G3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Atp6v1c1Q9Z1G3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Atp6v1c1Q9Z1G3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp6v1c1Q9Z1G3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.69■■□□□ 1.06
Atp6v1c1Q9Z1G3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp6v1c1Q9Z1G3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp6v1c1Q9Z1G3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atp6v1c1Q9Z1G3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp6v1c1Q9Z1G3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp6v1c1Q9Z1G3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp6v1c1Q9Z1G3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Gm30023-201ENSMUST00000197970 889 ntBASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp6v1c1Q9Z1G3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp6v1c1Q9Z1G3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.66■■□□□ 1.06
Atp6v1c1Q9Z1G3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp6v1c1Q9Z1G3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp6v1c1Q9Z1G3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp6v1c1Q9Z1G3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp6v1c1Q9Z1G3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp6v1c1Q9Z1G3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atp6v1c1Q9Z1G3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp6v1c1Q9Z1G3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Atp6v1c1Q9Z1G3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.64■■□□□ 1.05
Atp6v1c1Q9Z1G3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atp6v1c1Q9Z1G3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atp6v1c1Q9Z1G3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Atp6v1c1Q9Z1G3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp6v1c1Q9Z1G3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp6v1c1Q9Z1G3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.63■■□□□ 1.05
Atp6v1c1Q9Z1G3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp6v1c1Q9Z1G3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp6v1c1Q9Z1G3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.62■■□□□ 1.05
Atp6v1c1Q9Z1G3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.61■■□□□ 1.05
Atp6v1c1Q9Z1G3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Atp6v1c1Q9Z1G3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Atp6v1c1Q9Z1G3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6v1c1Q9Z1G3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 Nkain2-201ENSMUST00000092602 558 ntBASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6v1c1Q9Z1G3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6v1c1Q9Z1G3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp6v1c1Q9Z1G3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp6v1c1Q9Z1G3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Atp6v1c1Q9Z1G3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp6v1c1Q9Z1G3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp6v1c1Q9Z1G3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms