Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcf1Q9QZM3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcf1Q9QZM3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcf1Q9QZM3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcf1Q9QZM3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcf1Q9QZM3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcf1Q9QZM3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clcf1Q9QZM3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clcf1Q9QZM3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcf1Q9QZM3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcf1Q9QZM3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcf1Q9QZM3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
Clcf1Q9QZM3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clcf1Q9QZM3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcf1Q9QZM3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcf1Q9QZM3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcf1Q9QZM3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcf1Q9QZM3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcf1Q9QZM3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcf1Q9QZM3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcf1Q9QZM3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.05■□□□□ 0.8
Clcf1Q9QZM3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcf1Q9QZM3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcf1Q9QZM3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcf1Q9QZM3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Clcf1Q9QZM3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcf1Q9QZM3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.02■□□□□ 0.8
Clcf1Q9QZM3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clcf1Q9QZM3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcf1Q9QZM3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcf1Q9QZM3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.02■□□□□ 0.79
Clcf1Q9QZM3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcf1Q9QZM3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcf1Q9QZM3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcf1Q9QZM3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clcf1Q9QZM3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcf1Q9QZM3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcf1Q9QZM3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcf1Q9QZM3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Clcf1Q9QZM3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcf1Q9QZM3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcf1Q9QZM3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcf1Q9QZM3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcf1Q9QZM3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcf1Q9QZM3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Clcf1Q9QZM3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcf1Q9QZM3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcf1Q9QZM3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.94■□□□□ 0.78
Clcf1Q9QZM3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms