Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.89■□□□□ 0.77
Sec61a2Q9JLR1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sec61a2Q9JLR1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sec61a2Q9JLR1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.89■□□□□ 0.77
Sec61a2Q9JLR1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.88■□□□□ 0.77
Sec61a2Q9JLR1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sec61a2Q9JLR1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sec61a2Q9JLR1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.86■□□□□ 0.77
Sec61a2Q9JLR1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sec61a2Q9JLR1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.86■□□□□ 0.77
Sec61a2Q9JLR1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sec61a2Q9JLR1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sec61a2Q9JLR1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sec61a2Q9JLR1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sec61a2Q9JLR1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a2Q9JLR1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.83■□□□□ 0.76
Sec61a2Q9JLR1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a2Q9JLR1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sec61a2Q9JLR1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Sec61a2Q9JLR1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sec61a2Q9JLR1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sec61a2Q9JLR1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sec61a2Q9JLR1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sec61a2Q9JLR1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sec61a2Q9JLR1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sec61a2Q9JLR1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sec61a2Q9JLR1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sec61a2Q9JLR1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Terc-201ENSMUST00000082862 423 ntBASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sec61a2Q9JLR1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sec61a2Q9JLR1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms