Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rtp4Q9ER80 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtp4Q9ER80 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtp4Q9ER80 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtp4Q9ER80 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.84■□□□□ 0.93
Rtp4Q9ER80 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtp4Q9ER80 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtp4Q9ER80 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtp4Q9ER80 Gm14523-201ENSMUST00000117260 558 ntBASIC20.82■□□□□ 0.92
Rtp4Q9ER80 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtp4Q9ER80 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rtp4Q9ER80 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtp4Q9ER80 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Terc-201ENSMUST00000082862 423 ntBASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtp4Q9ER80 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rtp4Q9ER80 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rtp4Q9ER80 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rtp4Q9ER80 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Rtp4Q9ER80 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtp4Q9ER80 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rtp4Q9ER80 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.74■□□□□ 0.91
Rtp4Q9ER80 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.74■□□□□ 0.91
Rtp4Q9ER80 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rtp4Q9ER80 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtp4Q9ER80 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rtp4Q9ER80 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtp4Q9ER80 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtp4Q9ER80 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtp4Q9ER80 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtp4Q9ER80 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rtp4Q9ER80 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rtp4Q9ER80 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.7■□□□□ 0.9
Rtp4Q9ER80 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtp4Q9ER80 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtp4Q9ER80 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtp4Q9ER80 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms