Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Gm16437-201ENSMUST00000025669 507 ntBASIC21.37■■□□□ 1.01
Clca3a2Q9EQR4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clca3a2Q9EQR4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clca3a2Q9EQR4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Clca3a2Q9EQR4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clca3a2Q9EQR4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.35■■□□□ 1.01
Clca3a2Q9EQR4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clca3a2Q9EQR4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Clca3a2Q9EQR4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.34■■□□□ 1.01
Clca3a2Q9EQR4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Clca3a2Q9EQR4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clca3a2Q9EQR4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clca3a2Q9EQR4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clca3a2Q9EQR4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Clca3a2Q9EQR4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.33■■□□□ 1
Clca3a2Q9EQR4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clca3a2Q9EQR4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.32■■□□□ 1
Clca3a2Q9EQR4 Gm44428-201ENSMUST00000204474 874 ntBASIC21.32■■□□□ 1
Clca3a2Q9EQR4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clca3a2Q9EQR4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clca3a2Q9EQR4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Clca3a2Q9EQR4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Clca3a2Q9EQR4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Clca3a2Q9EQR4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.31■■□□□ 1
Clca3a2Q9EQR4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clca3a2Q9EQR4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Clca3a2Q9EQR4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clca3a2Q9EQR4 Gm11175-201ENSMUST00000116172 543 ntBASIC21.29■■□□□ 1
Clca3a2Q9EQR4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.29■■□□□ 1
Clca3a2Q9EQR4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.29■■□□□ 1
Clca3a2Q9EQR4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Clca3a2Q9EQR4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Clca3a2Q9EQR4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.28■■□□□ 1
Clca3a2Q9EQR4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Clca3a2Q9EQR4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Clca3a2Q9EQR4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Clca3a2Q9EQR4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Clca3a2Q9EQR4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clca3a2Q9EQR4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Clca3a2Q9EQR4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clca3a2Q9EQR4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Clca3a2Q9EQR4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Clca3a2Q9EQR4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clca3a2Q9EQR4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.21■□□□□ 0.99
Clca3a2Q9EQR4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clca3a2Q9EQR4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Clca3a2Q9EQR4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clca3a2Q9EQR4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clca3a2Q9EQR4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clca3a2Q9EQR4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clca3a2Q9EQR4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clca3a2Q9EQR4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clca3a2Q9EQR4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clca3a2Q9EQR4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Clca3a2Q9EQR4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca3a2Q9EQR4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca3a2Q9EQR4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca3a2Q9EQR4 Mir6538-201ENSMUST00000183713 110 ntBASIC21.18■□□□□ 0.98
Clca3a2Q9EQR4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clca3a2Q9EQR4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca3a2Q9EQR4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clca3a2Q9EQR4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Clca3a2Q9EQR4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clca3a2Q9EQR4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms