Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn3Q9DCB1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn3Q9DCB1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn3Q9DCB1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn3Q9DCB1 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.97■□□□□ 0.95
Hmgn3Q9DCB1 Gm30023-201ENSMUST00000197970 889 ntBASIC20.97■□□□□ 0.95
Hmgn3Q9DCB1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn3Q9DCB1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn3Q9DCB1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Hmgn3Q9DCB1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn3Q9DCB1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn3Q9DCB1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn3Q9DCB1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Hmgn3Q9DCB1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgn3Q9DCB1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.95■□□□□ 0.94
Hmgn3Q9DCB1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn3Q9DCB1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn3Q9DCB1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn3Q9DCB1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn3Q9DCB1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn3Q9DCB1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hmgn3Q9DCB1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn3Q9DCB1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn3Q9DCB1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn3Q9DCB1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.92■□□□□ 0.94
Hmgn3Q9DCB1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgn3Q9DCB1 Zfp131-205ENSMUST00000223812 663 ntBASIC20.91■□□□□ 0.94
Hmgn3Q9DCB1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hmgn3Q9DCB1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn3Q9DCB1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hmgn3Q9DCB1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgn3Q9DCB1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgn3Q9DCB1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.89■□□□□ 0.93
Hmgn3Q9DCB1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgn3Q9DCB1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn3Q9DCB1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn3Q9DCB1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn3Q9DCB1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn3Q9DCB1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn3Q9DCB1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hmgn3Q9DCB1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn3Q9DCB1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn3Q9DCB1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.85■□□□□ 0.93
Hmgn3Q9DCB1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn3Q9DCB1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.85■□□□□ 0.93
Hmgn3Q9DCB1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn3Q9DCB1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hmgn3Q9DCB1 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.84■□□□□ 0.93
Hmgn3Q9DCB1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.84■□□□□ 0.93
Hmgn3Q9DCB1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Hmgn3Q9DCB1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Hmgn3Q9DCB1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn3Q9DCB1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn3Q9DCB1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn3Q9DCB1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn3Q9DCB1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn3Q9DCB1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.81■□□□□ 0.92
Hmgn3Q9DCB1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms