Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22■■□□□ 1.11
Rrp8Q9DB85 Gm18755-201ENSMUST00000218030 1099 ntBASIC22■■□□□ 1.11
Rrp8Q9DB85 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rrp8Q9DB85 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rrp8Q9DB85 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rrp8Q9DB85 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.98■■□□□ 1.11
Rrp8Q9DB85 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rrp8Q9DB85 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Rrp8Q9DB85 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rrp8Q9DB85 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rrp8Q9DB85 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.97■■□□□ 1.11
Rrp8Q9DB85 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rrp8Q9DB85 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rrp8Q9DB85 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rrp8Q9DB85 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Rrp8Q9DB85 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rrp8Q9DB85 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rrp8Q9DB85 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rrp8Q9DB85 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rrp8Q9DB85 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Rrp8Q9DB85 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Gm9959-201ENSMUST00000068277 390 ntBASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rrp8Q9DB85 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rrp8Q9DB85 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rrp8Q9DB85 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rrp8Q9DB85 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rrp8Q9DB85 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
Rrp8Q9DB85 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rrp8Q9DB85 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rrp8Q9DB85 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.9■■□□□ 1.1
Rrp8Q9DB85 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rrp8Q9DB85 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rrp8Q9DB85 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rrp8Q9DB85 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rrp8Q9DB85 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rrp8Q9DB85 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rrp8Q9DB85 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rrp8Q9DB85 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rrp8Q9DB85 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rrp8Q9DB85 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Gm10232-201ENSMUST00000089221 720 ntBASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rrp8Q9DB85 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rrp8Q9DB85 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rrp8Q9DB85 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rrp8Q9DB85 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rrp8Q9DB85 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rrp8Q9DB85 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rrp8Q9DB85 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.83■■□□□ 1.09
Rrp8Q9DB85 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rrp8Q9DB85 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rrp8Q9DB85 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.83■■□□□ 1.08
Rrp8Q9DB85 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rrp8Q9DB85 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rrp8Q9DB85 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.82■■□□□ 1.08
Rrp8Q9DB85 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rrp8Q9DB85 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms