Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rhox4aQ9D3I8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rhox4aQ9D3I8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rhox4aQ9D3I8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rhox4aQ9D3I8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rhox4aQ9D3I8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rhox4aQ9D3I8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rhox4aQ9D3I8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rhox4aQ9D3I8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rhox4aQ9D3I8 Gm24970-201ENSMUST00000175582 82 ntBASIC18.33■□□□□ 0.52
Rhox4aQ9D3I8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.33■□□□□ 0.52
Rhox4aQ9D3I8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.33■□□□□ 0.52
Rhox4aQ9D3I8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rhox4aQ9D3I8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rhox4aQ9D3I8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rhox4aQ9D3I8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rhox4aQ9D3I8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rhox4aQ9D3I8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.3■□□□□ 0.52
Rhox4aQ9D3I8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhox4aQ9D3I8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhox4aQ9D3I8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhox4aQ9D3I8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rhox4aQ9D3I8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhox4aQ9D3I8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.29■□□□□ 0.52
Rhox4aQ9D3I8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhox4aQ9D3I8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhox4aQ9D3I8 Particl-201ENSMUST00000205370 1560 ntBASIC18.28■□□□□ 0.52
Rhox4aQ9D3I8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhox4aQ9D3I8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhox4aQ9D3I8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhox4aQ9D3I8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhox4aQ9D3I8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Rhox4aQ9D3I8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhox4aQ9D3I8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rhox4aQ9D3I8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Gm9397-201ENSMUST00000200125 605 ntBASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.26■□□□□ 0.51
Rhox4aQ9D3I8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4aQ9D3I8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4aQ9D3I8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhox4aQ9D3I8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhox4aQ9D3I8 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rhox4aQ9D3I8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rhox4aQ9D3I8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rhox4aQ9D3I8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rhox4aQ9D3I8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms