Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.3■■□□□ 1
Upk1aQ9D132 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upk1aQ9D132 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.3■■□□□ 1
Upk1aQ9D132 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Upk1aQ9D132 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.3■■□□□ 1
Upk1aQ9D132 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk1aQ9D132 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.29■■□□□ 1
Upk1aQ9D132 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Upk1aQ9D132 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk1aQ9D132 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk1aQ9D132 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk1aQ9D132 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.29■■□□□ 1
Upk1aQ9D132 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk1aQ9D132 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.28■■□□□ 1
Upk1aQ9D132 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.28■■□□□ 1
Upk1aQ9D132 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upk1aQ9D132 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upk1aQ9D132 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upk1aQ9D132 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.27■■□□□ 1
Upk1aQ9D132 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.27■■□□□ 1
Upk1aQ9D132 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Upk1aQ9D132 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Gm37136-201ENSMUST00000194368 194 ntBASIC21.26■□□□□ 0.99
Upk1aQ9D132 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Upk1aQ9D132 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Upk1aQ9D132 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Upk1aQ9D132 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.25■□□□□ 0.99
Upk1aQ9D132 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Upk1aQ9D132 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upk1aQ9D132 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.24■□□□□ 0.99
Upk1aQ9D132 Nkain2-201ENSMUST00000092602 558 ntBASIC21.24■□□□□ 0.99
Upk1aQ9D132 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upk1aQ9D132 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upk1aQ9D132 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.23■□□□□ 0.99
Upk1aQ9D132 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk1aQ9D132 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.22■□□□□ 0.99
Upk1aQ9D132 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk1aQ9D132 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk1aQ9D132 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk1aQ9D132 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk1aQ9D132 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Upk1aQ9D132 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upk1aQ9D132 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.19■□□□□ 0.98
Upk1aQ9D132 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk1aQ9D132 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Upk1aQ9D132 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Upk1aQ9D132 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk1aQ9D132 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk1aQ9D132 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk1aQ9D132 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Upk1aQ9D132 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk1aQ9D132 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk1aQ9D132 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk1aQ9D132 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk1aQ9D132 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk1aQ9D132 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk1aQ9D132 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Upk1aQ9D132 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Upk1aQ9D132 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk1aQ9D132 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.14■□□□□ 0.98
Upk1aQ9D132 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upk1aQ9D132 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.14■□□□□ 0.97
Upk1aQ9D132 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upk1aQ9D132 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upk1aQ9D132 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.13■□□□□ 0.97
Upk1aQ9D132 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk1aQ9D132 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Upk1aQ9D132 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Upk1aQ9D132 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Upk1aQ9D132 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk1aQ9D132 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk1aQ9D132 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Upk1aQ9D132 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk1aQ9D132 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Upk1aQ9D132 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upk1aQ9D132 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Upk1aQ9D132 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Upk1aQ9D132 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upk1aQ9D132 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms