Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.28■■□□□ 1
Ndufs4Q9CXZ1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ndufs4Q9CXZ1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufs4Q9CXZ1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndufs4Q9CXZ1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.26■□□□□ 0.99
Ndufs4Q9CXZ1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndufs4Q9CXZ1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndufs4Q9CXZ1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufs4Q9CXZ1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufs4Q9CXZ1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.25■□□□□ 0.99
Ndufs4Q9CXZ1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufs4Q9CXZ1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufs4Q9CXZ1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.24■□□□□ 0.99
Ndufs4Q9CXZ1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndufs4Q9CXZ1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndufs4Q9CXZ1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndufs4Q9CXZ1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.23■□□□□ 0.99
Ndufs4Q9CXZ1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufs4Q9CXZ1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufs4Q9CXZ1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufs4Q9CXZ1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufs4Q9CXZ1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufs4Q9CXZ1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.21■□□□□ 0.99
Ndufs4Q9CXZ1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.21■□□□□ 0.99
Ndufs4Q9CXZ1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndufs4Q9CXZ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ndufs4Q9CXZ1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.2■□□□□ 0.98
Ndufs4Q9CXZ1 Gm44428-201ENSMUST00000204474 874 ntBASIC21.2■□□□□ 0.98
Ndufs4Q9CXZ1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ndufs4Q9CXZ1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndufs4Q9CXZ1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ndufs4Q9CXZ1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.19■□□□□ 0.98
Ndufs4Q9CXZ1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ndufs4Q9CXZ1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.19■□□□□ 0.98
Ndufs4Q9CXZ1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufs4Q9CXZ1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
Ndufs4Q9CXZ1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufs4Q9CXZ1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Ndufs4Q9CXZ1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufs4Q9CXZ1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufs4Q9CXZ1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ndufs4Q9CXZ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ndufs4Q9CXZ1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndufs4Q9CXZ1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndufs4Q9CXZ1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ndufs4Q9CXZ1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufs4Q9CXZ1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufs4Q9CXZ1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufs4Q9CXZ1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufs4Q9CXZ1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
Ndufs4Q9CXZ1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ndufs4Q9CXZ1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ndufs4Q9CXZ1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndufs4Q9CXZ1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.13■□□□□ 0.97
Ndufs4Q9CXZ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndufs4Q9CXZ1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ndufs4Q9CXZ1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ndufs4Q9CXZ1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ndufs4Q9CXZ1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.11■□□□□ 0.97
Ndufs4Q9CXZ1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ndufs4Q9CXZ1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ndufs4Q9CXZ1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ndufs4Q9CXZ1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms