Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn1Q9CWM4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn1Q9CWM4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn1Q9CWM4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn1Q9CWM4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pfdn1Q9CWM4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.64■□□□□ 0.74
Pfdn1Q9CWM4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pfdn1Q9CWM4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn1Q9CWM4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn1Q9CWM4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn1Q9CWM4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pfdn1Q9CWM4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn1Q9CWM4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn1Q9CWM4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn1Q9CWM4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn1Q9CWM4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn1Q9CWM4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pfdn1Q9CWM4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pfdn1Q9CWM4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pfdn1Q9CWM4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pfdn1Q9CWM4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pfdn1Q9CWM4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pfdn1Q9CWM4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.57■□□□□ 0.72
Pfdn1Q9CWM4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Pfdn1Q9CWM4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pfdn1Q9CWM4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn1Q9CWM4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn1Q9CWM4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn1Q9CWM4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn1Q9CWM4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn1Q9CWM4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pfdn1Q9CWM4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn1Q9CWM4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn1Q9CWM4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pfdn1Q9CWM4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn1Q9CWM4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn1Q9CWM4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfdn1Q9CWM4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfdn1Q9CWM4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Pfdn1Q9CWM4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pfdn1Q9CWM4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pfdn1Q9CWM4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pfdn1Q9CWM4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.51■□□□□ 0.71
Pfdn1Q9CWM4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn1Q9CWM4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn1Q9CWM4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms