Protein–RNA interactions for Protein: Q9CQ90

Uncharacterized protein C9orf85 homolog, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQ90 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQ90 Gm14523-201ENSMUST00000117260 558 ntBASIC18.82■□□□□ 0.6
Q9CQ90 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.82■□□□□ 0.6
Q9CQ90 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQ90 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQ90 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Q9CQ90 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQ90 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.81■□□□□ 0.6
Q9CQ90 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQ90 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.81■□□□□ 0.6
Q9CQ90 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQ90 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQ90 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQ90 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9CQ90 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Q9CQ90 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQ90 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQ90 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQ90 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQ90 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQ90 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Q9CQ90 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQ90 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.79■□□□□ 0.6
Q9CQ90 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQ90 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Q9CQ90 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQ90 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQ90 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.78■□□□□ 0.6
Q9CQ90 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQ90 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Q9CQ90 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQ90 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Q9CQ90 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQ90 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.77■□□□□ 0.6
Q9CQ90 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQ90 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQ90 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CQ90 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CQ90 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CQ90 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Q9CQ90 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CQ90 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.76■□□□□ 0.59
Q9CQ90 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CQ90 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CQ90 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CQ90 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CQ90 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CQ90 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Q9CQ90 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CQ90 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Q9CQ90 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Q9CQ90 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CQ90 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CQ90 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CQ90 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CQ90 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Q9CQ90 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.73■□□□□ 0.59
Q9CQ90 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.73■□□□□ 0.59
Q9CQ90 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Q9CQ90 Gm15823-201ENSMUST00000064305 670 ntBASIC18.73■□□□□ 0.59
Q9CQ90 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CQ90 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CQ90 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CQ90 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.72■□□□□ 0.59
Q9CQ90 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CQ90 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CQ90 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9CQ90 Gm44428-201ENSMUST00000204474 874 ntBASIC18.72■□□□□ 0.59
Q9CQ90 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.72■□□□□ 0.59
Q9CQ90 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.72■□□□□ 0.59
Q9CQ90 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q9CQ90 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CQ90 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CQ90 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CQ90 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CQ90 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CQ90 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CQ90 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CQ90 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CQ90 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Q9CQ90 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CQ90 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CQ90 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CQ90 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Q9CQ90 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CQ90 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CQ90 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CQ90 Gm10420-201ENSMUST00000121713 882 ntBASIC18.68■□□□□ 0.58
Q9CQ90 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CQ90 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CQ90 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.68■□□□□ 0.58
Q9CQ90 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CQ90 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CQ90 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CQ90 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CQ90 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CQ90 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Q9CQ90 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CQ90 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.66■□□□□ 0.58
Q9CQ90 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms