Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf111Q99ML9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf111Q99ML9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf111Q99ML9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.62■■□□□ 1.05
Rnf111Q99ML9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf111Q99ML9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf111Q99ML9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf111Q99ML9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.59■■□□□ 1.05
Rnf111Q99ML9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf111Q99ML9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.58■■□□□ 1.05
Rnf111Q99ML9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf111Q99ML9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf111Q99ML9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rnf111Q99ML9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf111Q99ML9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf111Q99ML9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf111Q99ML9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf111Q99ML9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf111Q99ML9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf111Q99ML9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf111Q99ML9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf111Q99ML9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf111Q99ML9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf111Q99ML9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf111Q99ML9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf111Q99ML9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf111Q99ML9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf111Q99ML9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rnf111Q99ML9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf111Q99ML9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.54■■□□□ 1.04
Rnf111Q99ML9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf111Q99ML9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf111Q99ML9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf111Q99ML9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf111Q99ML9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf111Q99ML9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rnf111Q99ML9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf111Q99ML9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.51■■□□□ 1.03
Rnf111Q99ML9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rnf111Q99ML9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf111Q99ML9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf111Q99ML9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf111Q99ML9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rnf111Q99ML9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.47■■□□□ 1.03
Rnf111Q99ML9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf111Q99ML9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf111Q99ML9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.47■■□□□ 1.03
Rnf111Q99ML9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf111Q99ML9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf111Q99ML9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf111Q99ML9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf111Q99ML9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms