Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.06■■□□□ 1.44
Pcdha2Q91Y17 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdha2Q91Y17 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.05■■□□□ 1.44
Pcdha2Q91Y17 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha2Q91Y17 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha2Q91Y17 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha2Q91Y17 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha2Q91Y17 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha2Q91Y17 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.04■■□□□ 1.44
Pcdha2Q91Y17 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha2Q91Y17 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha2Q91Y17 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Pcdha2Q91Y17 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha2Q91Y17 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha2Q91Y17 Gm14523-201ENSMUST00000117260 558 ntBASIC24.03■■□□□ 1.44
Pcdha2Q91Y17 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha2Q91Y17 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha2Q91Y17 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Cap2-205ENSMUST00000225824 1634 ntBASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdha2Q91Y17 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Pcdha2Q91Y17 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha2Q91Y17 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24■■□□□ 1.43
Pcdha2Q91Y17 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
Pcdha2Q91Y17 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha2Q91Y17 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha2Q91Y17 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.99■■□□□ 1.43
Pcdha2Q91Y17 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha2Q91Y17 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Pcdha2Q91Y17 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.98■■□□□ 1.43
Pcdha2Q91Y17 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha2Q91Y17 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha2Q91Y17 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha2Q91Y17 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Pcdha2Q91Y17 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha2Q91Y17 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha2Q91Y17 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pcdha2Q91Y17 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha2Q91Y17 Gm7332-201ENSMUST00000118351 454 ntBASIC23.95■■□□□ 1.42
Pcdha2Q91Y17 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcdha2Q91Y17 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
Pcdha2Q91Y17 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha2Q91Y17 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha2Q91Y17 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha2Q91Y17 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcdha2Q91Y17 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.93■■□□□ 1.42
Pcdha2Q91Y17 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Pcdha2Q91Y17 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Pcdha2Q91Y17 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Pcdha2Q91Y17 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha2Q91Y17 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha2Q91Y17 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha2Q91Y17 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha2Q91Y17 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha2Q91Y17 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha2Q91Y17 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha2Q91Y17 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha2Q91Y17 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha2Q91Y17 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha2Q91Y17 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha2Q91Y17 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha2Q91Y17 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha2Q91Y17 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha2Q91Y17 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdha2Q91Y17 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdha2Q91Y17 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha2Q91Y17 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdha2Q91Y17 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha2Q91Y17 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha2Q91Y17 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Pcdha2Q91Y17 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha2Q91Y17 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha2Q91Y17 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha2Q91Y17 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha2Q91Y17 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms