Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb8Q91XZ2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb8Q91XZ2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb8Q91XZ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb8Q91XZ2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb8Q91XZ2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb8Q91XZ2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhb8Q91XZ2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb8Q91XZ2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb8Q91XZ2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcdhb8Q91XZ2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.66■■□□□ 1.06
Pcdhb8Q91XZ2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb8Q91XZ2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb8Q91XZ2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb8Q91XZ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb8Q91XZ2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb8Q91XZ2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb8Q91XZ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb8Q91XZ2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.62■■□□□ 1.05
Pcdhb8Q91XZ2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb8Q91XZ2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb8Q91XZ2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb8Q91XZ2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcdhb8Q91XZ2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.58■■□□□ 1.04
Pcdhb8Q91XZ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb8Q91XZ2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.57■■□□□ 1.04
Pcdhb8Q91XZ2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb8Q91XZ2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms