Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ssx2ipQ8VC66 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Ssx2ipQ8VC66 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.61■■□□□ 1.21
Ssx2ipQ8VC66 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ssx2ipQ8VC66 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ssx2ipQ8VC66 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssx2ipQ8VC66 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssx2ipQ8VC66 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ssx2ipQ8VC66 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssx2ipQ8VC66 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssx2ipQ8VC66 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssx2ipQ8VC66 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssx2ipQ8VC66 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssx2ipQ8VC66 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.56■■□□□ 1.2
Ssx2ipQ8VC66 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ssx2ipQ8VC66 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ssx2ipQ8VC66 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssx2ipQ8VC66 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssx2ipQ8VC66 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ssx2ipQ8VC66 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssx2ipQ8VC66 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssx2ipQ8VC66 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssx2ipQ8VC66 Cap2-205ENSMUST00000225824 1634 ntBASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ssx2ipQ8VC66 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Ssx2ipQ8VC66 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssx2ipQ8VC66 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssx2ipQ8VC66 Terc-201ENSMUST00000082862 423 ntBASIC22.52■■□□□ 1.2
Ssx2ipQ8VC66 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssx2ipQ8VC66 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.51■■□□□ 1.19
Ssx2ipQ8VC66 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ssx2ipQ8VC66 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Ssx2ipQ8VC66 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.48■■□□□ 1.19
Ssx2ipQ8VC66 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ssx2ipQ8VC66 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ssx2ipQ8VC66 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ssx2ipQ8VC66 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ssx2ipQ8VC66 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ssx2ipQ8VC66 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Gm9806-201ENSMUST00000051080 552 ntBASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms