Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chrna3Q8R4G9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chrna3Q8R4G9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chrna3Q8R4G9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Chrna3Q8R4G9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Chrna3Q8R4G9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.89■■□□□ 1.1
Chrna3Q8R4G9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.89■■□□□ 1.09
Chrna3Q8R4G9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chrna3Q8R4G9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chrna3Q8R4G9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chrna3Q8R4G9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chrna3Q8R4G9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Chrna3Q8R4G9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chrna3Q8R4G9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chrna3Q8R4G9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chrna3Q8R4G9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Chrna3Q8R4G9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chrna3Q8R4G9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chrna3Q8R4G9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Chrna3Q8R4G9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chrna3Q8R4G9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Chrna3Q8R4G9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chrna3Q8R4G9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chrna3Q8R4G9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chrna3Q8R4G9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chrna3Q8R4G9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chrna3Q8R4G9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Chrna3Q8R4G9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chrna3Q8R4G9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.82■■□□□ 1.08
Chrna3Q8R4G9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chrna3Q8R4G9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.82■■□□□ 1.08
Chrna3Q8R4G9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chrna3Q8R4G9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chrna3Q8R4G9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chrna3Q8R4G9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chrna3Q8R4G9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chrna3Q8R4G9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Chrna3Q8R4G9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chrna3Q8R4G9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chrna3Q8R4G9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chrna3Q8R4G9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chrna3Q8R4G9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.75■■□□□ 1.07
Chrna3Q8R4G9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.75■■□□□ 1.07
Chrna3Q8R4G9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chrna3Q8R4G9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chrna3Q8R4G9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.74■■□□□ 1.07
Chrna3Q8R4G9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chrna3Q8R4G9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chrna3Q8R4G9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chrna3Q8R4G9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chrna3Q8R4G9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms