Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cuedc1Q8R3V6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cuedc1Q8R3V6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cuedc1Q8R3V6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cuedc1Q8R3V6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cuedc1Q8R3V6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cuedc1Q8R3V6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cuedc1Q8R3V6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cuedc1Q8R3V6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cuedc1Q8R3V6 Gm43566-201ENSMUST00000196851 808 ntBASIC20■□□□□ 0.79
Cuedc1Q8R3V6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cuedc1Q8R3V6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cuedc1Q8R3V6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 Gm44428-201ENSMUST00000204474 874 ntBASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cuedc1Q8R3V6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.98■□□□□ 0.79
Cuedc1Q8R3V6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cuedc1Q8R3V6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cuedc1Q8R3V6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cuedc1Q8R3V6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cuedc1Q8R3V6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cuedc1Q8R3V6 Gm15820-201ENSMUST00000201566 728 ntBASIC19.97■□□□□ 0.79
Cuedc1Q8R3V6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cuedc1Q8R3V6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cuedc1Q8R3V6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cuedc1Q8R3V6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Gm45102-201ENSMUST00000207427 857 ntBASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Cuedc1Q8R3V6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cuedc1Q8R3V6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Cuedc1Q8R3V6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cuedc1Q8R3V6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cuedc1Q8R3V6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.94■□□□□ 0.78
Cuedc1Q8R3V6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cuedc1Q8R3V6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.93■□□□□ 0.78
Cuedc1Q8R3V6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cuedc1Q8R3V6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.93■□□□□ 0.78
Cuedc1Q8R3V6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cuedc1Q8R3V6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.91■□□□□ 0.78
Cuedc1Q8R3V6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cuedc1Q8R3V6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cuedc1Q8R3V6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Cuedc1Q8R3V6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.91■□□□□ 0.78
Cuedc1Q8R3V6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Gm45444-201ENSMUST00000211394 898 ntBASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cuedc1Q8R3V6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cuedc1Q8R3V6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cuedc1Q8R3V6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cuedc1Q8R3V6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms