Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.49■■□□□ 1.03
Defb35Q8R2I3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.49■■□□□ 1.03
Defb35Q8R2I3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Defb35Q8R2I3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.48■■□□□ 1.03
Defb35Q8R2I3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.48■■□□□ 1.03
Defb35Q8R2I3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Defb35Q8R2I3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Defb35Q8R2I3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Defb35Q8R2I3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.46■■□□□ 1.03
Defb35Q8R2I3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Defb35Q8R2I3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.46■■□□□ 1.03
Defb35Q8R2I3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Defb35Q8R2I3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.45■■□□□ 1.03
Defb35Q8R2I3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Defb35Q8R2I3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.44■■□□□ 1.02
Defb35Q8R2I3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Defb35Q8R2I3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Defb35Q8R2I3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Defb35Q8R2I3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Defb35Q8R2I3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.41■■□□□ 1.02
Defb35Q8R2I3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Defb35Q8R2I3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Defb35Q8R2I3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb35Q8R2I3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb35Q8R2I3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Defb35Q8R2I3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.4■■□□□ 1.02
Defb35Q8R2I3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Defb35Q8R2I3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.39■■□□□ 1.01
Defb35Q8R2I3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Defb35Q8R2I3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Defb35Q8R2I3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Defb35Q8R2I3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Defb35Q8R2I3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.37■■□□□ 1.01
Defb35Q8R2I3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Defb35Q8R2I3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Defb35Q8R2I3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Defb35Q8R2I3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.36■■□□□ 1.01
Defb35Q8R2I3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.36■■□□□ 1.01
Defb35Q8R2I3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Defb35Q8R2I3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Defb35Q8R2I3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb35Q8R2I3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Defb35Q8R2I3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Defb35Q8R2I3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Defb35Q8R2I3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Defb35Q8R2I3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.34■■□□□ 1.01
Defb35Q8R2I3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Defb35Q8R2I3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.33■■□□□ 1.01
Defb35Q8R2I3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Defb35Q8R2I3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.33■■□□□ 1
Defb35Q8R2I3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Defb35Q8R2I3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.32■■□□□ 1
Defb35Q8R2I3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.32■■□□□ 1
Defb35Q8R2I3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.32■■□□□ 1
Defb35Q8R2I3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Defb35Q8R2I3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
Defb35Q8R2I3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 228.7 ms