Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Zcchc9Q8R1J3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc9Q8R1J3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Zcchc9Q8R1J3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc9Q8R1J3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc9Q8R1J3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc9Q8R1J3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Zcchc9Q8R1J3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc9Q8R1J3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zcchc9Q8R1J3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zcchc9Q8R1J3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zcchc9Q8R1J3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Zcchc9Q8R1J3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Zcchc9Q8R1J3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Zcchc9Q8R1J3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zcchc9Q8R1J3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Zcchc9Q8R1J3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Zcchc9Q8R1J3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Zcchc9Q8R1J3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Zcchc9Q8R1J3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zcchc9Q8R1J3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zcchc9Q8R1J3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zcchc9Q8R1J3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.14■■□□□ 1.13
Zcchc9Q8R1J3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zcchc9Q8R1J3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zcchc9Q8R1J3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zcchc9Q8R1J3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Zcchc9Q8R1J3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Zcchc9Q8R1J3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.12■■□□□ 1.13
Zcchc9Q8R1J3 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.12■■□□□ 1.13
Zcchc9Q8R1J3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Zcchc9Q8R1J3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.11■■□□□ 1.13
Zcchc9Q8R1J3 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.11■■□□□ 1.13
Zcchc9Q8R1J3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Zcchc9Q8R1J3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Zcchc9Q8R1J3 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.11■■□□□ 1.13
Zcchc9Q8R1J3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zcchc9Q8R1J3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Zcchc9Q8R1J3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zcchc9Q8R1J3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zcchc9Q8R1J3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zcchc9Q8R1J3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Zcchc9Q8R1J3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.08■■□□□ 1.13
Zcchc9Q8R1J3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zcchc9Q8R1J3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Zcchc9Q8R1J3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Zcchc9Q8R1J3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 Gm15820-201ENSMUST00000201566 728 ntBASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.06■■□□□ 1.12
Zcchc9Q8R1J3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Zcchc9Q8R1J3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zcchc9Q8R1J3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zcchc9Q8R1J3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.05■■□□□ 1.12
Zcchc9Q8R1J3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Gm13238-201ENSMUST00000117655 780 ntBASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Gm15039-201ENSMUST00000118914 875 ntBASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zcchc9Q8R1J3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zcchc9Q8R1J3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zcchc9Q8R1J3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.03■■□□□ 1.12
Zcchc9Q8R1J3 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.03■■□□□ 1.12
Zcchc9Q8R1J3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Zcchc9Q8R1J3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zcchc9Q8R1J3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.01■■□□□ 1.11
Zcchc9Q8R1J3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.01■■□□□ 1.11
Zcchc9Q8R1J3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.01■■□□□ 1.11
Zcchc9Q8R1J3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22■■□□□ 1.11
Zcchc9Q8R1J3 Gm43566-201ENSMUST00000196851 808 ntBASIC22■■□□□ 1.11
Zcchc9Q8R1J3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22■■□□□ 1.11
Zcchc9Q8R1J3 AC117769.4-201ENSMUST00000225679 685 ntBASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms