Protein–RNA interactions for Protein: Q8K1S1

Lgi4, Leucine-rich repeat LGI family member 4, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi4Q8K1S1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lgi4Q8K1S1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lgi4Q8K1S1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.06■■□□□ 1.12
Lgi4Q8K1S1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lgi4Q8K1S1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Lgi4Q8K1S1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Lgi4Q8K1S1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Lgi4Q8K1S1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Lgi4Q8K1S1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lgi4Q8K1S1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lgi4Q8K1S1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lgi4Q8K1S1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lgi4Q8K1S1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Lgi4Q8K1S1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.03■■□□□ 1.12
Lgi4Q8K1S1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lgi4Q8K1S1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Lgi4Q8K1S1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lgi4Q8K1S1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lgi4Q8K1S1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lgi4Q8K1S1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lgi4Q8K1S1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lgi4Q8K1S1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lgi4Q8K1S1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lgi4Q8K1S1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lgi4Q8K1S1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lgi4Q8K1S1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Lgi4Q8K1S1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Lgi4Q8K1S1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Lgi4Q8K1S1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Lgi4Q8K1S1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lgi4Q8K1S1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lgi4Q8K1S1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.99■■□□□ 1.11
Lgi4Q8K1S1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lgi4Q8K1S1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lgi4Q8K1S1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.97■■□□□ 1.11
Lgi4Q8K1S1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lgi4Q8K1S1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lgi4Q8K1S1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lgi4Q8K1S1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lgi4Q8K1S1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.95■■□□□ 1.1
Lgi4Q8K1S1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.94■■□□□ 1.1
Lgi4Q8K1S1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.94■■□□□ 1.1
Lgi4Q8K1S1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.94■■□□□ 1.1
Lgi4Q8K1S1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Lgi4Q8K1S1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lgi4Q8K1S1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lgi4Q8K1S1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lgi4Q8K1S1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lgi4Q8K1S1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi4Q8K1S1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.92■■□□□ 1.1
Lgi4Q8K1S1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi4Q8K1S1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi4Q8K1S1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi4Q8K1S1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi4Q8K1S1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi4Q8K1S1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.9■■□□□ 1.1
Lgi4Q8K1S1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lgi4Q8K1S1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lgi4Q8K1S1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Lgi4Q8K1S1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Lgi4Q8K1S1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi4Q8K1S1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Etf1-202ENSMUST00000180351 108 ntBASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi4Q8K1S1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi4Q8K1S1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
Lgi4Q8K1S1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi4Q8K1S1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.87■■□□□ 1.09
Lgi4Q8K1S1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Lgi4Q8K1S1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi4Q8K1S1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi4Q8K1S1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi4Q8K1S1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi4Q8K1S1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.85■■□□□ 1.09
Lgi4Q8K1S1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms